PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN47843.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 236aa    MW: 25840.4 Da    PI: 8.6969
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN47843.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.19.8e-1180126554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +  rE+ RRdr+N++f eL  +l +    +  K +Ka+iL  Av+ + +L
  KHN47843.1  80 KACREKLRRDRLNDKFVELGAILEPG---RPAKTDKAAILIDAVRMVTQL 126
                 678**********************8...89**************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.49375126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-1279145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.88E-779131No hitNo description
PfamPF000101.9E-879126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-881132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-1282148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MVSRENTNWL FDYGLIDDIP VPDATFGVNS SAFTWPPNAL NASSNVGVEI DGSLGDSDSL  60
KESGSKKRVR SESCAASGSK ACREKLRRDR LNDKFVELGA ILEPGRPAKT DKAAILIDAV  120
RMVTQLRGEA QKLKDTNQGL QEKIKELKAE KNELRDEKQR LKAEKEKLEQ QLKSLNAQPS  180
FMPPPAAMPA AFAAQGQAHG NKLVPFISYP GVAMWQFMPP AAVDTSQDHV LRPPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0985610.0BT098561.1 Soybean clone JCVI-FLGm-12L19 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003527314.11e-174PREDICTED: transcription factor ILR3-like
SwissprotQ9FH371e-114ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A0B2SSH11e-174A0A0B2SSH1_GLYSO; Transcription factor ILR3
TrEMBLI1KEF01e-174I1KEF0_SOYBN; Uncharacterized protein
STRINGGLYMA06G41620.11e-174(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16023486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-88bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]